Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav5-4A0A075B652 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Gm25214-201ENSMUST00000104573 129 ntBASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Olfr284-202ENSMUST00000206647 966 ntBASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5-4A0A075B652 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Gm9200-201ENSMUST00000118513 1354 ntBASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Gm14127-201ENSMUST00000117906 678 ntBASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Gm13297-201ENSMUST00000120205 934 ntBASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Gm6013-201ENSMUST00000212264 699 ntBASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Gm18935-201ENSMUST00000212692 664 ntBASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 AC153962.4-201ENSMUST00000217878 242 ntBASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Gm13615-201ENSMUST00000120242 1612 ntBASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav5-4A0A075B652 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 172.4 ms