Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
SrfQ9JM73 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SrfQ9JM73 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.32□□□□□ -0.6
SrfQ9JM73 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SrfQ9JM73 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.32□□□□□ -0.6
SrfQ9JM73 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.32□□□□□ -0.6
SrfQ9JM73 Gm23272-201ENSMUST00000104053 129 ntBASIC11.32□□□□□ -0.6
SrfQ9JM73 Gm25063-201ENSMUST00000104666 94 ntBASIC11.32□□□□□ -0.6
SrfQ9JM73 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.32□□□□□ -0.6
SrfQ9JM73 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.32□□□□□ -0.6
SrfQ9JM73 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Gm10807-201ENSMUST00000177134 795 ntBASIC11.32□□□□□ -0.6
SrfQ9JM73 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.32□□□□□ -0.6
SrfQ9JM73 Gm5100-201ENSMUST00000195631 589 ntBASIC11.32□□□□□ -0.6
SrfQ9JM73 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Gm8342-201ENSMUST00000209839 757 ntBASIC11.32□□□□□ -0.6
SrfQ9JM73 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC11.32□□□□□ -0.6
SrfQ9JM73 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.32□□□□□ -0.6
SrfQ9JM73 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.32□□□□□ -0.6
SrfQ9JM73 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SrfQ9JM73 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SrfQ9JM73 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.32□□□□□ -0.6
SrfQ9JM73 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SrfQ9JM73 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.32□□□□□ -0.6
SrfQ9JM73 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.32□□□□□ -0.6
SrfQ9JM73 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SrfQ9JM73 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SrfQ9JM73 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 Gm26831-201ENSMUST00000181458 1380 ntBASIC11.31□□□□□ -0.6
SrfQ9JM73 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SrfQ9JM73 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SrfQ9JM73 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 Gm15615-201ENSMUST00000118876 198 ntBASIC11.31□□□□□ -0.6
SrfQ9JM73 Gm14791-201ENSMUST00000119061 1166 ntBASIC11.31□□□□□ -0.6
SrfQ9JM73 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.31□□□□□ -0.6
SrfQ9JM73 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.31□□□□□ -0.6
SrfQ9JM73 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC11.31□□□□□ -0.6
SrfQ9JM73 Gm44315-201ENSMUST00000203041 219 ntBASIC11.31□□□□□ -0.6
SrfQ9JM73 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.31□□□□□ -0.6
SrfQ9JM73 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SrfQ9JM73 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.31□□□□□ -0.6
SrfQ9JM73 AC158981.3-201ENSMUST00000226844 1024 ntBASIC11.31□□□□□ -0.6
SrfQ9JM73 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SrfQ9JM73 Olfr584-201ENSMUST00000098210 964 ntBASIC11.31□□□□□ -0.6
SrfQ9JM73 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.31□□□□□ -0.6
SrfQ9JM73 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SrfQ9JM73 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SrfQ9JM73 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.31□□□□□ -0.6
SrfQ9JM73 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SrfQ9JM73 Gm45114-201ENSMUST00000208280 1349 ntBASIC11.31□□□□□ -0.6
SrfQ9JM73 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SrfQ9JM73 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SrfQ9JM73 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms