Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.82□□□□□ -0.36
Trim54Q9ERP3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim54Q9ERP3 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.81□□□□□ -0.36
Trim54Q9ERP3 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Gm23045-201ENSMUST00000175041 96 ntBASIC12.81□□□□□ -0.36
Trim54Q9ERP3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Gm4654-201ENSMUST00000183305 982 ntBASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Gm37299-201ENSMUST00000193951 826 ntBASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim54Q9ERP3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Gm11836-201ENSMUST00000121022 441 ntBASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Gm8737-201ENSMUST00000122208 642 ntBASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Gm6485-201ENSMUST00000160676 439 ntBASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Gm18367-201ENSMUST00000176139 600 ntBASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Gm10731-201ENSMUST00000181171 448 ntBASIC12.8□□□□□ -0.36
Trim54Q9ERP3 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.8□□□□□ -0.36
Trim54Q9ERP3 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim54Q9ERP3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms