Protein–RNA interactions for Protein: Q9D7I0

Shisa5, Protein shisa-5, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa5Q9D7I0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Shisa5Q9D7I0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Gm12036-201ENSMUST00000120008 530 ntBASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Gm28686-201ENSMUST00000187404 609 ntBASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa5Q9D7I0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Gm11511-201ENSMUST00000118146 540 ntBASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Gm25732-201ENSMUST00000175168 60 ntBASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Gm4310-201ENSMUST00000177847 889 ntBASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Gm45118-201ENSMUST00000208928 825 ntBASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa5Q9D7I0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms