Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx6-1Q99MA9 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx6-1Q99MA9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx6-1Q99MA9 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx6-1Q99MA9 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Nkx6-1Q99MA9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx6-1Q99MA9 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.15□□□□□ -0.63
Nkx6-1Q99MA9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Gm26134-201ENSMUST00000178484 110 ntBASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Gm21156-201ENSMUST00000189693 869 ntBASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 AC125117.2-201ENSMUST00000228344 1140 ntBASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.14□□□□□ -0.63
Nkx6-1Q99MA9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Gm24791-201ENSMUST00000104284 131 ntBASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Gm12419-201ENSMUST00000116649 636 ntBASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Gm13117-201ENSMUST00000120894 691 ntBASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Gm18460-201ENSMUST00000208088 464 ntBASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Gm45500-201ENSMUST00000211676 803 ntBASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx6-1Q99MA9 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms