Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip1Q922J3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC18.39■□□□□ 0.54
Clip1Q922J3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clip1Q922J3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC18.39■□□□□ 0.54
Clip1Q922J3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clip1Q922J3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Clip1Q922J3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Clip1Q922J3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip1Q922J3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip1Q922J3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC18.39■□□□□ 0.53
Clip1Q922J3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Clip1Q922J3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clip1Q922J3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clip1Q922J3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clip1Q922J3 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip1Q922J3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip1Q922J3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip1Q922J3 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Clip1Q922J3 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC18.39■□□□□ 0.53
Clip1Q922J3 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Clip1Q922J3 Gm42816-201ENSMUST00000198433 325 ntBASIC18.39■□□□□ 0.53
Clip1Q922J3 AC124457.1-201ENSMUST00000198845 120 ntBASIC18.39■□□□□ 0.53
Clip1Q922J3 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC18.39■□□□□ 0.53
Clip1Q922J3 Gm45592-201ENSMUST00000209605 1043 ntBASIC18.39■□□□□ 0.53
Clip1Q922J3 Gm8436-201ENSMUST00000210152 1080 ntBASIC18.39■□□□□ 0.53
Clip1Q922J3 Gm39288-201ENSMUST00000210554 446 ntBASIC18.39■□□□□ 0.53
Clip1Q922J3 Gm5749-201ENSMUST00000210673 1090 ntBASIC18.39■□□□□ 0.53
Clip1Q922J3 Gm5996-201ENSMUST00000211110 718 ntBASIC18.39■□□□□ 0.53
Clip1Q922J3 Ap3s1-202ENSMUST00000224622 978 ntBASIC18.39■□□□□ 0.53
Clip1Q922J3 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip1Q922J3 Gm16380-201ENSMUST00000077997 478 ntBASIC18.39■□□□□ 0.53
Clip1Q922J3 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip1Q922J3 Gm7278-201ENSMUST00000119836 1401 ntBASIC18.39■□□□□ 0.53
Clip1Q922J3 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Clip1Q922J3 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clip1Q922J3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip1Q922J3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clip1Q922J3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Clip1Q922J3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Clip1Q922J3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC18.38■□□□□ 0.53
Clip1Q922J3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Clip1Q922J3 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC18.38■□□□□ 0.53
Clip1Q922J3 Gm13117-201ENSMUST00000120894 691 ntBASIC18.38■□□□□ 0.53
Clip1Q922J3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC18.38■□□□□ 0.53
Clip1Q922J3 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Clip1Q922J3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC18.38■□□□□ 0.53
Clip1Q922J3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC18.38■□□□□ 0.53
Clip1Q922J3 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Clip1Q922J3 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clip1Q922J3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Clip1Q922J3 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip1Q922J3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip1Q922J3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip1Q922J3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip1Q922J3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip1Q922J3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC18.37■□□□□ 0.53
Clip1Q922J3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip1Q922J3 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip1Q922J3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip1Q922J3 Gm45428-201ENSMUST00000209619 1789 ntBASIC18.37■□□□□ 0.53
Clip1Q922J3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip1Q922J3 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC18.37■□□□□ 0.53
Clip1Q922J3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Clip1Q922J3 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC18.37■□□□□ 0.53
Clip1Q922J3 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip1Q922J3 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clip1Q922J3 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Clip1Q922J3 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC18.37■□□□□ 0.53
Clip1Q922J3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC18.37■□□□□ 0.53
Clip1Q922J3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Clip1Q922J3 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC18.37■□□□□ 0.53
Clip1Q922J3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clip1Q922J3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Clip1Q922J3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip1Q922J3 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip1Q922J3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Clip1Q922J3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clip1Q922J3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip1Q922J3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC18.36■□□□□ 0.53
Clip1Q922J3 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clip1Q922J3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC18.36■□□□□ 0.53
Clip1Q922J3 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clip1Q922J3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms