Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex1Q91XB0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.5□□□□□ -0.25
Trex1Q91XB0 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.5□□□□□ -0.25
Trex1Q91XB0 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex1Q91XB0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trex1Q91XB0 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.49□□□□□ -0.25
Trex1Q91XB0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Gm22442-201ENSMUST00000157256 144 ntBASIC13.49□□□□□ -0.25
Trex1Q91XB0 Gm15744-201ENSMUST00000161734 213 ntBASIC13.49□□□□□ -0.25
Trex1Q91XB0 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Gm5100-201ENSMUST00000195631 589 ntBASIC13.49□□□□□ -0.25
Trex1Q91XB0 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.49□□□□□ -0.25
Trex1Q91XB0 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.49□□□□□ -0.25
Trex1Q91XB0 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.49□□□□□ -0.25
Trex1Q91XB0 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trex1Q91XB0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.48□□□□□ -0.25
Trex1Q91XB0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.48□□□□□ -0.25
Trex1Q91XB0 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Gm25766-201ENSMUST00000104101 131 ntBASIC13.48□□□□□ -0.25
Trex1Q91XB0 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.48□□□□□ -0.25
Trex1Q91XB0 Gm37826-201ENSMUST00000195329 322 ntBASIC13.48□□□□□ -0.25
Trex1Q91XB0 Gm17825-201ENSMUST00000206836 794 ntBASIC13.48□□□□□ -0.25
Trex1Q91XB0 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex1Q91XB0 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.48□□□□□ -0.25
Trex1Q91XB0 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms