Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Gm25492-201ENSMUST00000157383 129 ntBASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Gm8384-201ENSMUST00000190905 704 ntBASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Gm7192-201ENSMUST00000210793 1137 ntBASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 AC154436.1-201ENSMUST00000227272 782 ntBASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx54Q8K4L0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Gm13094-201ENSMUST00000117930 409 ntBASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Gm14165-201ENSMUST00000121456 952 ntBASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Gm15549-201ENSMUST00000121595 622 ntBASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Gm15982-201ENSMUST00000121681 554 ntBASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Gm45310-201ENSMUST00000210436 275 ntBASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Gm8255-201ENSMUST00000218693 305 ntBASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 CT010480.2-201ENSMUST00000225424 737 ntBASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 AC164099.1-201ENSMUST00000227780 333 ntBASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Gm4978-201ENSMUST00000071565 801 ntBASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.4■□□□□ 0.06
Ddx54Q8K4L0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Gm15329-201ENSMUST00000121408 155 ntBASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Gm5395-201ENSMUST00000121650 915 ntBASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Gm7627-201ENSMUST00000183205 999 ntBASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Gm18123-201ENSMUST00000210874 822 ntBASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Gm6331-201ENSMUST00000217890 450 ntBASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Gm7525-201ENSMUST00000219425 454 ntBASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Capsl-202ENSMUST00000226688 739 ntBASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ddx54Q8K4L0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ddx54Q8K4L0 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms