Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Gm13408-201ENSMUST00000119822 798 ntBASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Gm13935-201ENSMUST00000121859 798 ntBASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.75□□□□□ -0.21
Alx1Q8C8B0 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.75□□□□□ -0.21
Alx1Q8C8B0 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Alx1Q8C8B0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Mir6546-201ENSMUST00000184460 62 ntBASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Gm43002-201ENSMUST00000200310 155 ntBASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Gm18753-201ENSMUST00000201000 566 ntBASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Alx1Q8C8B0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Gm13611-201ENSMUST00000118269 318 ntBASIC13.73□□□□□ -0.21
Alx1Q8C8B0 Gm15432-201ENSMUST00000121106 195 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms