Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim9Q8C7M3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trim9Q8C7M3 Mir877-201ENSMUST00000104738 85 ntBASIC13□□□□□ -0.33
Trim9Q8C7M3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13□□□□□ -0.33
Trim9Q8C7M3 Gm14208-201ENSMUST00000119645 678 ntBASIC13□□□□□ -0.33
Trim9Q8C7M3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13□□□□□ -0.33
Trim9Q8C7M3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13□□□□□ -0.33
Trim9Q8C7M3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim9Q8C7M3 Mir8093-201ENSMUST00000185043 137 ntBASIC13□□□□□ -0.33
Trim9Q8C7M3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13□□□□□ -0.33
Trim9Q8C7M3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13□□□□□ -0.33
Trim9Q8C7M3 AC113082.1-201ENSMUST00000217324 327 ntBASIC13□□□□□ -0.33
Trim9Q8C7M3 Gm807-202ENSMUST00000224929 408 ntBASIC13□□□□□ -0.33
Trim9Q8C7M3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim9Q8C7M3 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim9Q8C7M3 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim9Q8C7M3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim9Q8C7M3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim9Q8C7M3 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim9Q8C7M3 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim9Q8C7M3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim9Q8C7M3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13□□□□□ -0.33
Trim9Q8C7M3 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Gm12857-201ENSMUST00000117678 592 ntBASIC12.99□□□□□ -0.33
Trim9Q8C7M3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Gm28686-201ENSMUST00000187404 609 ntBASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Gm4857-201ENSMUST00000192718 785 ntBASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Gm5982-201ENSMUST00000196234 512 ntBASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Gm7940-201ENSMUST00000218195 769 ntBASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Gm8385-201ENSMUST00000058999 643 ntBASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trim9Q8C7M3 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Gm8420-201ENSMUST00000097103 598 ntBASIC12.98□□□□□ -0.33
Trim9Q8C7M3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim9Q8C7M3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms