Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SprnQ8BWU1 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
SprnQ8BWU1 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SprnQ8BWU1 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SprnQ8BWU1 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SprnQ8BWU1 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.43□□□□□ -0.74
SprnQ8BWU1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SprnQ8BWU1 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SprnQ8BWU1 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SprnQ8BWU1 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SprnQ8BWU1 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SprnQ8BWU1 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SprnQ8BWU1 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SprnQ8BWU1 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
SprnQ8BWU1 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SprnQ8BWU1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.42□□□□□ -0.74
SprnQ8BWU1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.42□□□□□ -0.74
SprnQ8BWU1 Gm12241-201ENSMUST00000118330 726 ntBASIC10.42□□□□□ -0.74
SprnQ8BWU1 Gm5419-201ENSMUST00000119301 527 ntBASIC10.42□□□□□ -0.74
SprnQ8BWU1 Gm13786-201ENSMUST00000122371 333 ntBASIC10.42□□□□□ -0.74
SprnQ8BWU1 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Gm8738-201ENSMUST00000172606 329 ntBASIC10.42□□□□□ -0.74
SprnQ8BWU1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Gm3890-201ENSMUST00000182416 207 ntBASIC10.42□□□□□ -0.74
SprnQ8BWU1 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.42□□□□□ -0.74
SprnQ8BWU1 Gm38341-201ENSMUST00000195357 515 ntBASIC10.42□□□□□ -0.74
SprnQ8BWU1 Gm18893-201ENSMUST00000198416 943 ntBASIC10.42□□□□□ -0.74
SprnQ8BWU1 Gm18584-201ENSMUST00000203098 964 ntBASIC10.42□□□□□ -0.74
SprnQ8BWU1 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.42□□□□□ -0.74
SprnQ8BWU1 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SprnQ8BWU1 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SprnQ8BWU1 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SprnQ8BWU1 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Gm2991-201ENSMUST00000173338 480 ntBASIC10.41□□□□□ -0.74
SprnQ8BWU1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.41□□□□□ -0.74
SprnQ8BWU1 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SprnQ8BWU1 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.41□□□□□ -0.74
SprnQ8BWU1 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.41□□□□□ -0.74
SprnQ8BWU1 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms