Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm12407-201ENSMUST00000180219 324 ntBASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Gm37028-201ENSMUST00000194276 107 ntBASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Gm42657-201ENSMUST00000201746 211 ntBASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Gm44506-201ENSMUST00000206278 965 ntBASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.53□□□□□ -0.4
Rd3Q8BRE0 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rd3Q8BRE0 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.52□□□□□ -0.4
Rd3Q8BRE0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rd3Q8BRE0 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.52□□□□□ -0.4
Rd3Q8BRE0 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rd3Q8BRE0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rd3Q8BRE0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rd3Q8BRE0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Rd3Q8BRE0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rd3Q8BRE0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.52□□□□□ -0.4
Rd3Q8BRE0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rd3Q8BRE0 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.52□□□□□ -0.4
Rd3Q8BRE0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rd3Q8BRE0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Rd3Q8BRE0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Gm12899-201ENSMUST00000120565 551 ntBASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Gm38151-201ENSMUST00000195085 289 ntBASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Gm6450-201ENSMUST00000200896 574 ntBASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rd3Q8BRE0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Gm16166-201ENSMUST00000118291 787 ntBASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Gm11675-201ENSMUST00000121873 832 ntBASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Gm7150-201ENSMUST00000122032 981 ntBASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.51□□□□□ -0.41
Rd3Q8BRE0 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.51□□□□□ -0.41
Rd3Q8BRE0 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms