Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Gm5298-201ENSMUST00000201122 892 ntBASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Gm42657-201ENSMUST00000201746 211 ntBASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Gm8342-201ENSMUST00000209839 757 ntBASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Gm9089-201ENSMUST00000122027 526 ntBASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Gm26134-201ENSMUST00000178484 110 ntBASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Gm37028-201ENSMUST00000194276 107 ntBASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Gm3793-201ENSMUST00000204973 672 ntBASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smarcal1Q8BJL0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Gm16166-201ENSMUST00000118291 787 ntBASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Gm15615-201ENSMUST00000118876 198 ntBASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Gm8459-201ENSMUST00000162504 760 ntBASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Gm7593-201ENSMUST00000187246 644 ntBASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.6□□□□□ -0.39
Smarcal1Q8BJL0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms