Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Gm25261-201ENSMUST00000157416 134 ntBASIC12.56□□□□□ -0.4
Trim6Q8BGE7 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Gm2594-201ENSMUST00000214774 742 ntBASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Gm37319-201ENSMUST00000193500 636 ntBASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Snora73a-201ENSMUST00000082453 205 ntBASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim6Q8BGE7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim6Q8BGE7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim6Q8BGE7 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.54□□□□□ -0.4
Trim6Q8BGE7 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim6Q8BGE7 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim6Q8BGE7 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim6Q8BGE7 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim6Q8BGE7 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trim6Q8BGE7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim6Q8BGE7 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim6Q8BGE7 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim6Q8BGE7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim6Q8BGE7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim6Q8BGE7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Trim6Q8BGE7 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim6Q8BGE7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms