Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col11a1Q61245 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Col11a1Q61245 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.97□□□□□ -0.33
Col11a1Q61245 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col11a1Q61245 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col11a1Q61245 Gm16305-201ENSMUST00000140747 556 ntBASIC12.97□□□□□ -0.33
Col11a1Q61245 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Gm26119-201ENSMUST00000175601 104 ntBASIC12.97□□□□□ -0.33
Col11a1Q61245 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.97□□□□□ -0.33
Col11a1Q61245 Gm44605-201ENSMUST00000206892 949 ntBASIC12.97□□□□□ -0.33
Col11a1Q61245 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col11a1Q61245 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.97□□□□□ -0.33
Col11a1Q61245 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.96□□□□□ -0.33
Col11a1Q61245 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.96□□□□□ -0.33
Col11a1Q61245 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col11a1Q61245 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col11a1Q61245 Gm44740-201ENSMUST00000205603 1614 ntBASIC12.96□□□□□ -0.33
Col11a1Q61245 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col11a1Q61245 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col11a1Q61245 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col11a1Q61245 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col11a1Q61245 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col11a1Q61245 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.96□□□□□ -0.33
Col11a1Q61245 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col11a1Q61245 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col11a1Q61245 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Col11a1Q61245 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col11a1Q61245 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col11a1Q61245 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.96□□□□□ -0.33
Col11a1Q61245 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC12.96□□□□□ -0.33
Col11a1Q61245 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col11a1Q61245 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Col11a1Q61245 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Col11a1Q61245 Gm15617-201ENSMUST00000118973 771 ntBASIC12.96□□□□□ -0.33
Col11a1Q61245 Gm5529-201ENSMUST00000165691 891 ntBASIC12.96□□□□□ -0.33
Col11a1Q61245 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC12.96□□□□□ -0.33
Col11a1Q61245 Gm37723-201ENSMUST00000194480 565 ntBASIC12.96□□□□□ -0.33
Col11a1Q61245 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC12.96□□□□□ -0.33
Col11a1Q61245 AC134537.1-201ENSMUST00000219205 265 ntBASIC12.96□□□□□ -0.33
Col11a1Q61245 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col11a1Q61245 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.96□□□□□ -0.34
Col11a1Q61245 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col11a1Q61245 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Col11a1Q61245 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col11a1Q61245 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col11a1Q61245 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col11a1Q61245 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.96□□□□□ -0.34
Col11a1Q61245 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col11a1Q61245 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col11a1Q61245 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.96□□□□□ -0.34
Col11a1Q61245 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col11a1Q61245 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col11a1Q61245 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col11a1Q61245 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm6216-201ENSMUST00000182390 687 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Mir6359-201ENSMUST00000183668 81 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm42751-201ENSMUST00000198065 559 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col11a1Q61245 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.95□□□□□ -0.34
Col11a1Q61245 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms