Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Cln3Q61124 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cln3Q61124 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Cln3Q61124 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cln3Q61124 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Cln3Q61124 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cln3Q61124 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cln3Q61124 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Cln3Q61124 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Cln3Q61124 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cln3Q61124 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cln3Q61124 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.95□□□□□ -0.34
Cln3Q61124 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.95□□□□□ -0.34
Cln3Q61124 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Gm14892-201ENSMUST00000117636 267 ntBASIC12.95□□□□□ -0.34
Cln3Q61124 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.95□□□□□ -0.34
Cln3Q61124 Gm11980-201ENSMUST00000121445 986 ntBASIC12.95□□□□□ -0.34
Cln3Q61124 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.95□□□□□ -0.34
Cln3Q61124 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cln3Q61124 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.95□□□□□ -0.34
Cln3Q61124 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC12.95□□□□□ -0.34
Cln3Q61124 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Cln3Q61124 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.95□□□□□ -0.34
Cln3Q61124 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.95□□□□□ -0.34
Cln3Q61124 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cln3Q61124 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cln3Q61124 Gm10263-201ENSMUST00000085163 300 ntBASIC12.95□□□□□ -0.34
Cln3Q61124 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cln3Q61124 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.95□□□□□ -0.34
Cln3Q61124 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cln3Q61124 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cln3Q61124 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.94□□□□□ -0.34
Cln3Q61124 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Gm45657-201ENSMUST00000211318 1349 ntBASIC12.94□□□□□ -0.34
Cln3Q61124 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cln3Q61124 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.94□□□□□ -0.34
Cln3Q61124 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cln3Q61124 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.94□□□□□ -0.34
Cln3Q61124 Gm15626-201ENSMUST00000117478 868 ntBASIC12.94□□□□□ -0.34
Cln3Q61124 Gm12247-201ENSMUST00000117585 670 ntBASIC12.94□□□□□ -0.34
Cln3Q61124 Gm10169-201ENSMUST00000121822 348 ntBASIC12.94□□□□□ -0.34
Cln3Q61124 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.94□□□□□ -0.34
Cln3Q61124 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.94□□□□□ -0.34
Cln3Q61124 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.94□□□□□ -0.34
Cln3Q61124 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cln3Q61124 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.94□□□□□ -0.34
Cln3Q61124 Gm8502-201ENSMUST00000185708 901 ntBASIC12.94□□□□□ -0.34
Cln3Q61124 Gm8510-201ENSMUST00000189202 895 ntBASIC12.94□□□□□ -0.34
Cln3Q61124 Gm2316-201ENSMUST00000190613 921 ntBASIC12.94□□□□□ -0.34
Cln3Q61124 Gm43163-201ENSMUST00000196571 442 ntBASIC12.94□□□□□ -0.34
Cln3Q61124 Gm42816-201ENSMUST00000198433 325 ntBASIC12.94□□□□□ -0.34
Cln3Q61124 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.94□□□□□ -0.34
Cln3Q61124 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cln3Q61124 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC12.94□□□□□ -0.34
Cln3Q61124 Gm35713-201ENSMUST00000210516 199 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms