Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Gm8302-201ENSMUST00000119217 852 ntBASIC11.35□□□□□ -0.59
Col12a1Q60847 Gm14639-201ENSMUST00000120850 866 ntBASIC11.35□□□□□ -0.59
Col12a1Q60847 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Gm5808-201ENSMUST00000178090 357 ntBASIC11.35□□□□□ -0.59
Col12a1Q60847 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC11.35□□□□□ -0.59
Col12a1Q60847 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC11.35□□□□□ -0.59
Col12a1Q60847 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.35□□□□□ -0.59
Col12a1Q60847 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Col12a1Q60847 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.35□□□□□ -0.59
Col12a1Q60847 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.35□□□□□ -0.59
Col12a1Q60847 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.35□□□□□ -0.59
Col12a1Q60847 Mir598-201ENSMUST00000102094 79 ntBASIC11.35□□□□□ -0.59
Col12a1Q60847 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.35□□□□□ -0.59
Col12a1Q60847 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.35□□□□□ -0.59
Col12a1Q60847 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Gm3635-201ENSMUST00000212314 354 ntBASIC11.35□□□□□ -0.59
Col12a1Q60847 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.35□□□□□ -0.59
Col12a1Q60847 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.35□□□□□ -0.59
Col12a1Q60847 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Col12a1Q60847 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Col12a1Q60847 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Col12a1Q60847 Snord23-201ENSMUST00000116828 109 ntBASIC11.34□□□□□ -0.59
Col12a1Q60847 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Gm23432-201ENSMUST00000157181 131 ntBASIC11.34□□□□□ -0.59
Col12a1Q60847 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Col12a1Q60847 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC11.34□□□□□ -0.59
Col12a1Q60847 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.34□□□□□ -0.59
Col12a1Q60847 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Col12a1Q60847 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Col12a1Q60847 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC11.34□□□□□ -0.59
Col12a1Q60847 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Gm14071-201ENSMUST00000117817 509 ntBASIC11.34□□□□□ -0.59
Col12a1Q60847 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Gm26047-201ENSMUST00000157308 113 ntBASIC11.34□□□□□ -0.59
Col12a1Q60847 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.34□□□□□ -0.59
Col12a1Q60847 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Gm8643-201ENSMUST00000195228 625 ntBASIC11.34□□□□□ -0.59
Col12a1Q60847 Gm26047-202ENSMUST00000198840 115 ntBASIC11.34□□□□□ -0.59
Col12a1Q60847 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.34□□□□□ -0.59
Col12a1Q60847 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Col12a1Q60847 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.34□□□□□ -0.59
Col12a1Q60847 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col12a1Q60847 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Col12a1Q60847 Gm7701-201ENSMUST00000163185 1479 ntBASIC11.34□□□□□ -0.59
Col12a1Q60847 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Col12a1Q60847 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
Col12a1Q60847 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Col12a1Q60847 Gm25591-201ENSMUST00000177317 94 ntBASIC11.33□□□□□ -0.6
Col12a1Q60847 Gm5254-201ENSMUST00000188353 977 ntBASIC11.33□□□□□ -0.6
Col12a1Q60847 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.33□□□□□ -0.6
Col12a1Q60847 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col12a1Q60847 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.33□□□□□ -0.6
Col12a1Q60847 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col12a1Q60847 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col12a1Q60847 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Col12a1Q60847 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Col12a1Q60847 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col12a1Q60847 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col12a1Q60847 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col12a1Q60847 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col12a1Q60847 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col12a1Q60847 Gm17836-201ENSMUST00000191976 1302 ntBASIC11.33□□□□□ -0.6
Col12a1Q60847 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms