Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Prdm1Q60636 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Prdm1Q60636 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Prdm1Q60636 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Prdm1Q60636 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Prdm1Q60636 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.78□□□□□ -0.2
Prdm1Q60636 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.78□□□□□ -0.2
Prdm1Q60636 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Prdm1Q60636 Gm14724-201ENSMUST00000118400 537 ntBASIC13.78□□□□□ -0.2
Prdm1Q60636 Gm15207-201ENSMUST00000119259 442 ntBASIC13.78□□□□□ -0.2
Prdm1Q60636 Gm11960-201ENSMUST00000122068 925 ntBASIC13.78□□□□□ -0.2
Prdm1Q60636 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.78□□□□□ -0.2
Prdm1Q60636 Gm28937-201ENSMUST00000185413 695 ntBASIC13.78□□□□□ -0.2
Prdm1Q60636 Gm29400-201ENSMUST00000187208 695 ntBASIC13.78□□□□□ -0.2
Prdm1Q60636 Gm28662-201ENSMUST00000188446 695 ntBASIC13.78□□□□□ -0.2
Prdm1Q60636 Gm28251-201ENSMUST00000188835 695 ntBASIC13.78□□□□□ -0.2
Prdm1Q60636 Gm37318-201ENSMUST00000194325 695 ntBASIC13.78□□□□□ -0.2
Prdm1Q60636 Gm38017-201ENSMUST00000194768 695 ntBASIC13.78□□□□□ -0.2
Prdm1Q60636 Gm37287-201ENSMUST00000195449 695 ntBASIC13.78□□□□□ -0.2
Prdm1Q60636 Gm37793-201ENSMUST00000195548 695 ntBASIC13.78□□□□□ -0.2
Prdm1Q60636 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Prdm1Q60636 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.78□□□□□ -0.2
Prdm1Q60636 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.78□□□□□ -0.2
Prdm1Q60636 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Prdm1Q60636 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Prdm1Q60636 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prdm1Q60636 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Prdm1Q60636 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Prdm1Q60636 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.77□□□□□ -0.21
Prdm1Q60636 Gm7851-201ENSMUST00000117574 323 ntBASIC13.77□□□□□ -0.21
Prdm1Q60636 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.77□□□□□ -0.21
Prdm1Q60636 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.77□□□□□ -0.21
Prdm1Q60636 Gm23699-201ENSMUST00000158835 135 ntBASIC13.77□□□□□ -0.21
Prdm1Q60636 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prdm1Q60636 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.77□□□□□ -0.21
Prdm1Q60636 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prdm1Q60636 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prdm1Q60636 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prdm1Q60636 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prdm1Q60636 Gm18827-201ENSMUST00000188341 790 ntBASIC13.77□□□□□ -0.21
Prdm1Q60636 Gm4482-201ENSMUST00000200876 742 ntBASIC13.77□□□□□ -0.21
Prdm1Q60636 Gm6450-201ENSMUST00000200896 574 ntBASIC13.77□□□□□ -0.21
Prdm1Q60636 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.77□□□□□ -0.21
Prdm1Q60636 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.77□□□□□ -0.21
Prdm1Q60636 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prdm1Q60636 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prdm1Q60636 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Prdm1Q60636 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
Prdm1Q60636 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Prdm1Q60636 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prdm1Q60636 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prdm1Q60636 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prdm1Q60636 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.77□□□□□ -0.21
Prdm1Q60636 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Prdm1Q60636 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prdm1Q60636 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Prdm1Q60636 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prdm1Q60636 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Prdm1Q60636 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prdm1Q60636 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prdm1Q60636 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prdm1Q60636 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Prdm1Q60636 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prdm1Q60636 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms