Protein–RNA interactions for Protein: Q02853

Mmp11, Stromelysin-3, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp11Q02853 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.5□□□□□ -0.57
Mmp11Q02853 Gm807-202ENSMUST00000224929 408 ntBASIC11.5□□□□□ -0.57
Mmp11Q02853 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.5□□□□□ -0.57
Mmp11Q02853 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Mmp11Q02853 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Mmp11Q02853 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Mmp11Q02853 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.5□□□□□ -0.57
Mmp11Q02853 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Mmp11Q02853 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.49□□□□□ -0.57
Mmp11Q02853 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Mmp11Q02853 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Mmp11Q02853 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Mmp11Q02853 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.49□□□□□ -0.57
Mmp11Q02853 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.49□□□□□ -0.57
Mmp11Q02853 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.49□□□□□ -0.57
Mmp11Q02853 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Gm38117-201ENSMUST00000194653 939 ntBASIC11.49□□□□□ -0.57
Mmp11Q02853 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Mmp11Q02853 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Mmp11Q02853 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Mmp11Q02853 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.49□□□□□ -0.57
Mmp11Q02853 Paupar-201ENSMUST00000194826 3482 ntBASIC11.49□□□□□ -0.57
Mmp11Q02853 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Mmp11Q02853 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Mmp11Q02853 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp11Q02853 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.49□□□□□ -0.57
Mmp11Q02853 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.48□□□□□ -0.57
Mmp11Q02853 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mmp11Q02853 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.48□□□□□ -0.57
Mmp11Q02853 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.48□□□□□ -0.57
Mmp11Q02853 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.48□□□□□ -0.57
Mmp11Q02853 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.48□□□□□ -0.57
Mmp11Q02853 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mmp11Q02853 Gm38314-201ENSMUST00000195709 625 ntBASIC11.48□□□□□ -0.57
Mmp11Q02853 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mmp11Q02853 Gm18730-201ENSMUST00000218038 343 ntBASIC11.48□□□□□ -0.57
Mmp11Q02853 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.48□□□□□ -0.57
Mmp11Q02853 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.48□□□□□ -0.57
Mmp11Q02853 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.48□□□□□ -0.57
Mmp11Q02853 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mmp11Q02853 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.48□□□□□ -0.57
Mmp11Q02853 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp11Q02853 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.48□□□□□ -0.57
Mmp11Q02853 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms