Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.66□□□□□ -0.38
VcpQ01853 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
VcpQ01853 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
VcpQ01853 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VcpQ01853 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
VcpQ01853 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
VcpQ01853 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.65□□□□□ -0.38
VcpQ01853 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
VcpQ01853 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
VcpQ01853 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.65□□□□□ -0.38
VcpQ01853 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.65□□□□□ -0.38
VcpQ01853 Gm37028-201ENSMUST00000194276 107 ntBASIC12.65□□□□□ -0.38
VcpQ01853 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
VcpQ01853 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.65□□□□□ -0.38
VcpQ01853 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.65□□□□□ -0.38
VcpQ01853 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.65□□□□□ -0.38
VcpQ01853 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
VcpQ01853 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.65□□□□□ -0.38
VcpQ01853 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
VcpQ01853 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VcpQ01853 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
VcpQ01853 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
VcpQ01853 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.64□□□□□ -0.39
VcpQ01853 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
VcpQ01853 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
VcpQ01853 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.64□□□□□ -0.39
VcpQ01853 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.64□□□□□ -0.39
VcpQ01853 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 Gm11941-201ENSMUST00000119904 610 ntBASIC12.64□□□□□ -0.39
VcpQ01853 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.64□□□□□ -0.39
VcpQ01853 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
VcpQ01853 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.64□□□□□ -0.39
VcpQ01853 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.64□□□□□ -0.39
VcpQ01853 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.64□□□□□ -0.39
VcpQ01853 Gm9463-201ENSMUST00000206707 601 ntBASIC12.64□□□□□ -0.39
VcpQ01853 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.64□□□□□ -0.39
VcpQ01853 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.64□□□□□ -0.39
VcpQ01853 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.64□□□□□ -0.39
VcpQ01853 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VcpQ01853 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms