Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim43cP86449 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim43cP86449 Gm23200-201ENSMUST00000104379 132 ntBASIC12.84□□□□□ -0.35
Trim43cP86449 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.84□□□□□ -0.35
Trim43cP86449 Gm15236-201ENSMUST00000117309 379 ntBASIC12.84□□□□□ -0.35
Trim43cP86449 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim43cP86449 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.84□□□□□ -0.35
Trim43cP86449 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.84□□□□□ -0.35
Trim43cP86449 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Trim43cP86449 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim43cP86449 Gm2383-201ENSMUST00000181461 807 ntBASIC12.84□□□□□ -0.35
Trim43cP86449 Mir7677-201ENSMUST00000184226 67 ntBASIC12.84□□□□□ -0.35
Trim43cP86449 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 AU022133-201ENSMUST00000200601 873 ntBASIC12.84□□□□□ -0.35
Trim43cP86449 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim43cP86449 Gm8385-201ENSMUST00000058999 643 ntBASIC12.84□□□□□ -0.35
Trim43cP86449 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim43cP86449 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim43cP86449 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim43cP86449 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.84□□□□□ -0.35
Trim43cP86449 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim43cP86449 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim43cP86449 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Trim43cP86449 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43cP86449 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim43cP86449 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Trim43cP86449 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim43cP86449 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trim43cP86449 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim43cP86449 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim43cP86449 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.83□□□□□ -0.36
Trim43cP86449 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.83□□□□□ -0.36
Trim43cP86449 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Gm14724-201ENSMUST00000118400 537 ntBASIC12.83□□□□□ -0.36
Trim43cP86449 Gm11439-201ENSMUST00000118598 409 ntBASIC12.83□□□□□ -0.36
Trim43cP86449 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim43cP86449 Gm807-202ENSMUST00000224929 408 ntBASIC12.83□□□□□ -0.36
Trim43cP86449 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim43cP86449 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trim43cP86449 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim43cP86449 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim43cP86449 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim43cP86449 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43cP86449 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43cP86449 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43cP86449 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43cP86449 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trim43cP86449 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43cP86449 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43cP86449 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.82□□□□□ -0.36
Trim43cP86449 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim43cP86449 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43cP86449 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43cP86449 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trim43cP86449 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.82□□□□□ -0.36
Trim43cP86449 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim43cP86449 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43cP86449 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim43cP86449 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim43cP86449 Gm27341-201ENSMUST00000183570 106 ntBASIC12.82□□□□□ -0.36
Trim43cP86449 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.82□□□□□ -0.36
Trim43cP86449 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms