Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Hmx3P42581 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.93□□□□□ -0.82
Hmx3P42581 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC9.93□□□□□ -0.82
Hmx3P42581 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC9.93□□□□□ -0.82
Hmx3P42581 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.93□□□□□ -0.82
Hmx3P42581 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.93□□□□□ -0.82
Hmx3P42581 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Hmx3P42581 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hmx3P42581 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Hmx3P42581 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Hmx3P42581 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hmx3P42581 Gm8131-201ENSMUST00000213783 1570 ntBASIC9.92□□□□□ -0.82
Hmx3P42581 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Hmx3P42581 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Hmx3P42581 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.92□□□□□ -0.82
Hmx3P42581 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Gm44775-201ENSMUST00000207266 1456 ntBASIC9.92□□□□□ -0.82
Hmx3P42581 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Hmx3P42581 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Hmx3P42581 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Hmx3P42581 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Hmx3P42581 Gm14921-201ENSMUST00000118643 908 ntBASIC9.92□□□□□ -0.82
Hmx3P42581 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Hmx3P42581 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC9.92□□□□□ -0.82
Hmx3P42581 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.92□□□□□ -0.82
Hmx3P42581 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.92□□□□□ -0.82
Hmx3P42581 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Hmx3P42581 Gm43858-201ENSMUST00000199418 1778 ntBASIC9.92□□□□□ -0.82
Hmx3P42581 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.92□□□□□ -0.82
Hmx3P42581 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.92□□□□□ -0.82
Hmx3P42581 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.92□□□□□ -0.82
Hmx3P42581 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Gm6992-201ENSMUST00000217973 1607 ntBASIC9.92□□□□□ -0.82
Hmx3P42581 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.92□□□□□ -0.82
Hmx3P42581 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC9.92□□□□□ -0.82
Hmx3P42581 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Hmx3P42581 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hmx3P42581 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Hmx3P42581 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Hmx3P42581 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
Hmx3P42581 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmx3P42581 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hmx3P42581 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Hmx3P42581 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Hmx3P42581 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.91□□□□□ -0.82
Hmx3P42581 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Hmx3P42581 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms