Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Clk1P22518 Adh6-ps1-201ENSMUST00000171054 2789 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
Clk1P22518 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clk1P22518 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Clk1P22518 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Clk1P22518 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.13□□□□□ -0.63
Clk1P22518 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Clk1P22518 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.13□□□□□ -0.63
Clk1P22518 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.13□□□□□ -0.63
Clk1P22518 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Clk1P22518 Gm37608-201ENSMUST00000195696 1880 ntBASIC11.13□□□□□ -0.63
Clk1P22518 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.13□□□□□ -0.63
Clk1P22518 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Clk1P22518 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.13□□□□□ -0.63
Clk1P22518 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Gm12015-201ENSMUST00000117065 843 ntBASIC11.13□□□□□ -0.63
Clk1P22518 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.13□□□□□ -0.63
Clk1P22518 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.13□□□□□ -0.63
Clk1P22518 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Clk1P22518 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.13□□□□□ -0.63
Clk1P22518 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.13□□□□□ -0.63
Clk1P22518 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Clk1P22518 Gm6621-201ENSMUST00000193251 772 ntBASIC11.13□□□□□ -0.63
Clk1P22518 Gm44364-201ENSMUST00000198368 141 ntBASIC11.13□□□□□ -0.63
Clk1P22518 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Gm9996-201ENSMUST00000070359 913 ntBASIC11.13□□□□□ -0.63
Clk1P22518 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Clk1P22518 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.13□□□□□ -0.63
Clk1P22518 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.13□□□□□ -0.63
Clk1P22518 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.13□□□□□ -0.63
Clk1P22518 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC11.13□□□□□ -0.63
Clk1P22518 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Clk1P22518 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Clk1P22518 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.13□□□□□ -0.63
Clk1P22518 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Clk1P22518 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Clk1P22518 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clk1P22518 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Clk1P22518 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Clk1P22518 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.12□□□□□ -0.63
Clk1P22518 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Gm25214-201ENSMUST00000104573 129 ntBASIC11.12□□□□□ -0.63
Clk1P22518 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.12□□□□□ -0.63
Clk1P22518 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.12□□□□□ -0.63
Clk1P22518 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.12□□□□□ -0.63
Clk1P22518 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Clk1P22518 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.12□□□□□ -0.63
Clk1P22518 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.12□□□□□ -0.63
Clk1P22518 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.12□□□□□ -0.63
Clk1P22518 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Gm10312-201ENSMUST00000078515 489 ntBASIC11.12□□□□□ -0.63
Clk1P22518 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC11.12□□□□□ -0.63
Clk1P22518 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clk1P22518 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.12□□□□□ -0.63
Clk1P22518 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms