Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cdx1P18111 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC9.59□□□□□ -0.87
Cdx1P18111 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC9.59□□□□□ -0.87
Cdx1P18111 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.59□□□□□ -0.87
Cdx1P18111 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdx1P18111 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC9.59□□□□□ -0.87
Cdx1P18111 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.59□□□□□ -0.87
Cdx1P18111 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cdx1P18111 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC9.59□□□□□ -0.87
Cdx1P18111 Tyms-ps-201ENSMUST00000219550 915 ntBASIC9.59□□□□□ -0.87
Cdx1P18111 AC140406.1-201ENSMUST00000226481 465 ntBASIC9.59□□□□□ -0.87
Cdx1P18111 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Cdx1P18111 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cdx1P18111 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdx1P18111 Gm9823-201ENSMUST00000051212 327 ntBASIC9.59□□□□□ -0.87
Cdx1P18111 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdx1P18111 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdx1P18111 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
Cdx1P18111 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC9.59□□□□□ -0.87
Cdx1P18111 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdx1P18111 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cdx1P18111 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Cdx1P18111 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC9.59□□□□□ -0.87
Cdx1P18111 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Cdx1P18111 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdx1P18111 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.87
Cdx1P18111 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdx1P18111 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Cdx1P18111 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdx1P18111 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdx1P18111 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdx1P18111 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cdx1P18111 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Cdx1P18111 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Cdx1P18111 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.58□□□□□ -0.88
Cdx1P18111 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Cdx1P18111 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Cdx1P18111 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Cdx1P18111 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Cdx1P18111 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Cdx1P18111 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Cdx1P18111 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.58□□□□□ -0.88
Cdx1P18111 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Cdx1P18111 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Gm13342-201ENSMUST00000121055 207 ntBASIC9.58□□□□□ -0.88
Cdx1P18111 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Gm2231-201ENSMUST00000125661 612 ntBASIC9.58□□□□□ -0.88
Cdx1P18111 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC9.58□□□□□ -0.88
Cdx1P18111 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.58□□□□□ -0.88
Cdx1P18111 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.58□□□□□ -0.88
Cdx1P18111 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC9.58□□□□□ -0.88
Cdx1P18111 Gm43133-201ENSMUST00000197472 463 ntBASIC9.58□□□□□ -0.88
Cdx1P18111 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC9.58□□□□□ -0.88
Cdx1P18111 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Cdx1P18111 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC9.58□□□□□ -0.88
Cdx1P18111 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Cdx1P18111 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.58□□□□□ -0.88
Cdx1P18111 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.58□□□□□ -0.88
Cdx1P18111 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Gm11298-201ENSMUST00000120503 1799 ntBASIC9.58□□□□□ -0.88
Cdx1P18111 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cdx1P18111 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.57□□□□□ -0.88
Cdx1P18111 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.57□□□□□ -0.88
Cdx1P18111 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Cdx1P18111 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Cdx1P18111 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cdx1P18111 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms