Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.7□□□□□ -0.7
TpbpaP13438 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.7□□□□□ -0.7
TpbpaP13438 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
TpbpaP13438 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.7□□□□□ -0.7
TpbpaP13438 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
TpbpaP13438 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.69□□□□□ -0.7
TpbpaP13438 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
TpbpaP13438 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.69□□□□□ -0.7
TpbpaP13438 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.69□□□□□ -0.7
TpbpaP13438 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.69□□□□□ -0.7
TpbpaP13438 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
TpbpaP13438 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.69□□□□□ -0.7
TpbpaP13438 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Gm24548-201ENSMUST00000158650 108 ntBASIC10.69□□□□□ -0.7
TpbpaP13438 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.69□□□□□ -0.7
TpbpaP13438 Gm6266-201ENSMUST00000203844 806 ntBASIC10.69□□□□□ -0.7
TpbpaP13438 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.69□□□□□ -0.7
TpbpaP13438 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.69□□□□□ -0.7
TpbpaP13438 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.69□□□□□ -0.7
TpbpaP13438 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.69□□□□□ -0.7
TpbpaP13438 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
TpbpaP13438 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
TpbpaP13438 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
TpbpaP13438 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Gm20796-201ENSMUST00000180355 5838 ntBASIC10.69□□□□□ -0.7
TpbpaP13438 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.69□□□□□ -0.7
TpbpaP13438 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
TpbpaP13438 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
TpbpaP13438 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TpbpaP13438 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TpbpaP13438 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TpbpaP13438 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
TpbpaP13438 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TpbpaP13438 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
TpbpaP13438 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
TpbpaP13438 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
TpbpaP13438 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TpbpaP13438 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
TpbpaP13438 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.68□□□□□ -0.7
TpbpaP13438 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.68□□□□□ -0.7
TpbpaP13438 Gm25261-201ENSMUST00000157416 134 ntBASIC10.68□□□□□ -0.7
TpbpaP13438 Gm17150-201ENSMUST00000165577 381 ntBASIC10.68□□□□□ -0.7
TpbpaP13438 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.68□□□□□ -0.7
TpbpaP13438 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
TpbpaP13438 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
TpbpaP13438 Gm28882-201ENSMUST00000185504 314 ntBASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms