Protein–RNA interactions for Protein: P10078

Zfp28, Zinc finger protein 28, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp28P10078 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.84□□□□□ -0.67
Zfp28P10078 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.84□□□□□ -0.67
Zfp28P10078 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.84□□□□□ -0.67
Zfp28P10078 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Zfp28P10078 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Zfp28P10078 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Zfp28P10078 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Zfp28P10078 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Zfp28P10078 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Zfp28P10078 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Zfp28P10078 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.84□□□□□ -0.67
Zfp28P10078 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Zfp28P10078 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Zfp28P10078 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Zfp28P10078 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Zfp28P10078 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Zfp28P10078 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.84□□□□□ -0.67
Zfp28P10078 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.84□□□□□ -0.67
Zfp28P10078 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Zfp28P10078 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.84□□□□□ -0.67
Zfp28P10078 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Zfp28P10078 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.84□□□□□ -0.67
Zfp28P10078 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Zfp28P10078 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Zfp28P10078 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Zfp28P10078 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Zfp28P10078 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.84□□□□□ -0.67
Zfp28P10078 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Zfp28P10078 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Zfp28P10078 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.83□□□□□ -0.68
Zfp28P10078 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Zfp28P10078 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.83□□□□□ -0.68
Zfp28P10078 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Zfp28P10078 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Zfp28P10078 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.83□□□□□ -0.68
Zfp28P10078 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Zfp28P10078 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.83□□□□□ -0.68
Zfp28P10078 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.83□□□□□ -0.68
Zfp28P10078 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Gm4986-201ENSMUST00000119731 549 ntBASIC10.83□□□□□ -0.68
Zfp28P10078 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.83□□□□□ -0.68
Zfp28P10078 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Gm25261-201ENSMUST00000157416 134 ntBASIC10.83□□□□□ -0.68
Zfp28P10078 Rprl1-201ENSMUST00000158050 327 ntBASIC10.83□□□□□ -0.68
Zfp28P10078 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Zfp28P10078 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Zfp28P10078 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.83□□□□□ -0.68
Zfp28P10078 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Zfp28P10078 Gm17931-201ENSMUST00000208132 634 ntBASIC10.83□□□□□ -0.68
Zfp28P10078 Gm7653-201ENSMUST00000214567 508 ntBASIC10.83□□□□□ -0.68
Zfp28P10078 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.83□□□□□ -0.68
Zfp28P10078 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.83□□□□□ -0.68
Zfp28P10078 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Zfp28P10078 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.83□□□□□ -0.68
Zfp28P10078 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.83□□□□□ -0.68
Zfp28P10078 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Zfp28P10078 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.83□□□□□ -0.68
Zfp28P10078 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.83□□□□□ -0.68
Zfp28P10078 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp28P10078 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Zfp28P10078 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Zfp28P10078 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Zfp28P10078 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp28P10078 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp28P10078 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp28P10078 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp28P10078 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Zfp28P10078 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp28P10078 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.82□□□□□ -0.68
Zfp28P10078 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp28P10078 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.82□□□□□ -0.68
Zfp28P10078 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp28P10078 Gm12390-201ENSMUST00000117897 397 ntBASIC10.82□□□□□ -0.68
Zfp28P10078 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.82□□□□□ -0.68
Zfp28P10078 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp28P10078 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.82□□□□□ -0.68
Zfp28P10078 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.82□□□□□ -0.68
Zfp28P10078 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms