Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
UbbP0CG49 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
UbbP0CG49 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.29□□□□□ -0.76
UbbP0CG49 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UbbP0CG49 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
UbbP0CG49 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.29□□□□□ -0.76
UbbP0CG49 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.29□□□□□ -0.76
UbbP0CG49 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
UbbP0CG49 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.28□□□□□ -0.76
UbbP0CG49 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.28□□□□□ -0.76
UbbP0CG49 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.28□□□□□ -0.76
UbbP0CG49 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
UbbP0CG49 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
UbbP0CG49 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.28□□□□□ -0.76
UbbP0CG49 Gm10434-201ENSMUST00000101158 471 ntBASIC10.28□□□□□ -0.76
UbbP0CG49 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Mir1247-201ENSMUST00000116706 82 ntBASIC10.28□□□□□ -0.76
UbbP0CG49 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.28□□□□□ -0.76
UbbP0CG49 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.28□□□□□ -0.76
UbbP0CG49 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.28□□□□□ -0.76
UbbP0CG49 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.28□□□□□ -0.76
UbbP0CG49 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.28□□□□□ -0.76
UbbP0CG49 Gm17931-201ENSMUST00000208132 634 ntBASIC10.28□□□□□ -0.76
UbbP0CG49 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.28□□□□□ -0.76
UbbP0CG49 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.28□□□□□ -0.76
UbbP0CG49 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
UbbP0CG49 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
UbbP0CG49 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
UbbP0CG49 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
UbbP0CG49 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.28□□□□□ -0.76
UbbP0CG49 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.28□□□□□ -0.76
UbbP0CG49 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
UbbP0CG49 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
UbbP0CG49 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
UbbP0CG49 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
UbbP0CG49 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
UbbP0CG49 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.76
UbbP0CG49 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
UbbP0CG49 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.27□□□□□ -0.76
UbbP0CG49 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
UbbP0CG49 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.27□□□□□ -0.77
UbbP0CG49 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
UbbP0CG49 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
UbbP0CG49 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.27□□□□□ -0.77
UbbP0CG49 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.27□□□□□ -0.77
UbbP0CG49 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.27□□□□□ -0.77
UbbP0CG49 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
UbbP0CG49 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms