Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc8P09025 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc8P09025 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc8P09025 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.51□□□□□ -0.41
Hoxc8P09025 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.51□□□□□ -0.41
Hoxc8P09025 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc8P09025 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxc8P09025 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.51□□□□□ -0.41
Hoxc8P09025 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc8P09025 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc8P09025 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc8P09025 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc8P09025 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc8P09025 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxc8P09025 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxc8P09025 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxc8P09025 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc8P09025 Gm12218-201ENSMUST00000117666 399 ntBASIC12.5□□□□□ -0.41
Hoxc8P09025 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.5□□□□□ -0.41
Hoxc8P09025 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.5□□□□□ -0.41
Hoxc8P09025 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc8P09025 Gm17192-201ENSMUST00000169031 511 ntBASIC12.5□□□□□ -0.41
Hoxc8P09025 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.5□□□□□ -0.41
Hoxc8P09025 Mir7051-201ENSMUST00000184167 73 ntBASIC12.5□□□□□ -0.41
Hoxc8P09025 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Gm37284-201ENSMUST00000193607 539 ntBASIC12.5□□□□□ -0.41
Hoxc8P09025 Gm30946-201ENSMUST00000198288 724 ntBASIC12.5□□□□□ -0.41
Hoxc8P09025 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.5□□□□□ -0.41
Hoxc8P09025 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.5□□□□□ -0.41
Hoxc8P09025 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.5□□□□□ -0.41
Hoxc8P09025 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxc8P09025 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxc8P09025 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.5□□□□□ -0.41
Hoxc8P09025 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc8P09025 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.49□□□□□ -0.41
Hoxc8P09025 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc8P09025 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.49□□□□□ -0.41
Hoxc8P09025 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc8P09025 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc8P09025 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc8P09025 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.49□□□□□ -0.41
Hoxc8P09025 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hoxc8P09025 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Gm24992-201ENSMUST00000157412 130 ntBASIC12.49□□□□□ -0.41
Hoxc8P09025 Gm22379-201ENSMUST00000157480 131 ntBASIC12.49□□□□□ -0.41
Hoxc8P09025 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hoxc8P09025 Gm9081-201ENSMUST00000182346 991 ntBASIC12.49□□□□□ -0.41
Hoxc8P09025 Gm43912-201ENSMUST00000204352 538 ntBASIC12.49□□□□□ -0.41
Hoxc8P09025 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms