Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC8.62□□□□□ -1.03
TcraP01849 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
TcraP01849 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC8.62□□□□□ -1.03
TcraP01849 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
TcraP01849 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC8.62□□□□□ -1.03
TcraP01849 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
TcraP01849 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC8.62□□□□□ -1.03
TcraP01849 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC8.62□□□□□ -1.03
TcraP01849 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC8.62□□□□□ -1.03
TcraP01849 Gm8099-201ENSMUST00000200510 742 ntBASIC8.62□□□□□ -1.03
TcraP01849 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC8.62□□□□□ -1.03
TcraP01849 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Gm17794-201ENSMUST00000220252 955 ntBASIC8.62□□□□□ -1.03
TcraP01849 AC134254.1-201ENSMUST00000221362 167 ntBASIC8.62□□□□□ -1.03
TcraP01849 AC159006.1-201ENSMUST00000226396 258 ntBASIC8.62□□□□□ -1.03
TcraP01849 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
TcraP01849 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
TcraP01849 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
TcraP01849 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 AC159195.3-201ENSMUST00000225162 2211 ntBASIC8.62□□□□□ -1.03
TcraP01849 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
TcraP01849 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Gm38157-201ENSMUST00000194178 1698 ntBASIC8.62□□□□□ -1.03
TcraP01849 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
TcraP01849 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
TcraP01849 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
TcraP01849 Gm21136-201ENSMUST00000186812 2575 ntBASIC8.62□□□□□ -1.03
TcraP01849 Gm6605-201ENSMUST00000031488 2574 ntBASIC8.62□□□□□ -1.03
TcraP01849 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
TcraP01849 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
TcraP01849 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Gm36940-201ENSMUST00000194281 2036 ntBASIC8.61□□□□□ -1.03
TcraP01849 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
TcraP01849 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
TcraP01849 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC8.61□□□□□ -1.03
TcraP01849 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
TcraP01849 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
TcraP01849 Gm13612-201ENSMUST00000119276 390 ntBASIC8.61□□□□□ -1.03
TcraP01849 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC8.61□□□□□ -1.03
TcraP01849 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC8.61□□□□□ -1.03
TcraP01849 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC8.61□□□□□ -1.03
TcraP01849 Gm9022-201ENSMUST00000182482 992 ntBASIC8.61□□□□□ -1.03
TcraP01849 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Gm9124-201ENSMUST00000191789 1092 ntBASIC8.61□□□□□ -1.03
TcraP01849 Gm9113-201ENSMUST00000192510 1018 ntBASIC8.61□□□□□ -1.03
TcraP01849 Gm9131-201ENSMUST00000193557 1089 ntBASIC8.61□□□□□ -1.03
TcraP01849 Gm9121-201ENSMUST00000193749 1071 ntBASIC8.61□□□□□ -1.03
TcraP01849 Gm42929-201ENSMUST00000198374 1286 ntBASIC8.61□□□□□ -1.03
TcraP01849 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC8.61□□□□□ -1.03
TcraP01849 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC8.61□□□□□ -1.03
TcraP01849 Gm8463-201ENSMUST00000208573 613 ntBASIC8.61□□□□□ -1.03
TcraP01849 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 AC154239.3-201ENSMUST00000226933 674 ntBASIC8.61□□□□□ -1.03
TcraP01849 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TcraP01849 Gm6180-201ENSMUST00000065243 498 ntBASIC8.61□□□□□ -1.03
TcraP01849 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms