Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Hcn1O88704 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.35□□□□□ -0.59
Hcn1O88704 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Hcn1O88704 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Hcn1O88704 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.35□□□□□ -0.59
Hcn1O88704 Gm6963-201ENSMUST00000147879 379 ntBASIC11.35□□□□□ -0.59
Hcn1O88704 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Gm18056-201ENSMUST00000207670 568 ntBASIC11.35□□□□□ -0.59
Hcn1O88704 Gm18061-201ENSMUST00000208350 562 ntBASIC11.35□□□□□ -0.59
Hcn1O88704 Gm18063-201ENSMUST00000208529 568 ntBASIC11.35□□□□□ -0.59
Hcn1O88704 Gm18052-201ENSMUST00000208750 559 ntBASIC11.35□□□□□ -0.59
Hcn1O88704 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.35□□□□□ -0.59
Hcn1O88704 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.35□□□□□ -0.59
Hcn1O88704 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.35□□□□□ -0.59
Hcn1O88704 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.35□□□□□ -0.59
Hcn1O88704 Gm9996-201ENSMUST00000070359 913 ntBASIC11.35□□□□□ -0.59
Hcn1O88704 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.35□□□□□ -0.59
Hcn1O88704 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.35□□□□□ -0.59
Hcn1O88704 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Hcn1O88704 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hcn1O88704 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hcn1O88704 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.34□□□□□ -0.59
Hcn1O88704 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hcn1O88704 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Gm15236-201ENSMUST00000117309 379 ntBASIC11.34□□□□□ -0.59
Hcn1O88704 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.34□□□□□ -0.59
Hcn1O88704 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.34□□□□□ -0.59
Hcn1O88704 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.34□□□□□ -0.59
Hcn1O88704 Gm5070-201ENSMUST00000177599 862 ntBASIC11.34□□□□□ -0.59
Hcn1O88704 Gm25700-201ENSMUST00000177693 110 ntBASIC11.34□□□□□ -0.59
Hcn1O88704 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Hcn1O88704 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hcn1O88704 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.34□□□□□ -0.59
Hcn1O88704 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.34□□□□□ -0.59
Hcn1O88704 Rprl1-202ENSMUST00000198476 238 ntBASIC11.34□□□□□ -0.59
Hcn1O88704 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Gm44651-201ENSMUST00000207343 372 ntBASIC11.34□□□□□ -0.59
Hcn1O88704 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.34□□□□□ -0.59
Hcn1O88704 Gm19994-201ENSMUST00000217086 586 ntBASIC11.34□□□□□ -0.59
Hcn1O88704 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.34□□□□□ -0.59
Hcn1O88704 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.34□□□□□ -0.59
Hcn1O88704 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.34□□□□□ -0.59
Hcn1O88704 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.34□□□□□ -0.59
Hcn1O88704 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hcn1O88704 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hcn1O88704 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.34□□□□□ -0.59
Hcn1O88704 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hcn1O88704 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Hcn1O88704 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hcn1O88704 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms