Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Efnb3O35393 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Efnb3O35393 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.34□□□□□ -0.91
Efnb3O35393 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Efnb3O35393 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.34□□□□□ -0.91
Efnb3O35393 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Efnb3O35393 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
Efnb3O35393 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.34□□□□□ -0.91
Efnb3O35393 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.34□□□□□ -0.91
Efnb3O35393 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.34□□□□□ -0.91
Efnb3O35393 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Efnb3O35393 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Efnb3O35393 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Efnb3O35393 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.34□□□□□ -0.91
Efnb3O35393 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Efnb3O35393 Gm27514-201ENSMUST00000183692 110 ntBASIC9.34□□□□□ -0.91
Efnb3O35393 Gm5370-201ENSMUST00000187187 574 ntBASIC9.34□□□□□ -0.91
Efnb3O35393 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.34□□□□□ -0.91
Efnb3O35393 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Gm4935-201ENSMUST00000221316 1198 ntBASIC9.34□□□□□ -0.91
Efnb3O35393 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.34□□□□□ -0.91
Efnb3O35393 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC9.34□□□□□ -0.91
Efnb3O35393 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Efnb3O35393 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Efnb3O35393 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Snora73a-201ENSMUST00000082453 205 ntBASIC9.34□□□□□ -0.91
Efnb3O35393 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Efnb3O35393 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Efnb3O35393 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.34□□□□□ -0.91
Efnb3O35393 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.34□□□□□ -0.91
Efnb3O35393 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Efnb3O35393 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Efnb3O35393 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Efnb3O35393 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Efnb3O35393 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Efnb3O35393 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Efnb3O35393 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Efnb3O35393 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Gm15610-201ENSMUST00000120584 195 ntBASIC9.33□□□□□ -0.92
Efnb3O35393 Gm14247-201ENSMUST00000120950 237 ntBASIC9.33□□□□□ -0.92
Efnb3O35393 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Gm8738-201ENSMUST00000172606 329 ntBASIC9.33□□□□□ -0.92
Efnb3O35393 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Gm8565-201ENSMUST00000183259 1014 ntBASIC9.33□□□□□ -0.92
Efnb3O35393 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC9.33□□□□□ -0.92
Efnb3O35393 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Efnb3O35393 Gm17931-201ENSMUST00000208132 634 ntBASIC9.33□□□□□ -0.92
Efnb3O35393 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.33□□□□□ -0.92
Efnb3O35393 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms