Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.11□□□□□ -0.47
AlyrefO08583 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.1□□□□□ -0.47
AlyrefO08583 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.1□□□□□ -0.47
AlyrefO08583 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Gm11957-201ENSMUST00000118304 779 ntBASIC12.1□□□□□ -0.47
AlyrefO08583 Gm15595-201ENSMUST00000120840 961 ntBASIC12.1□□□□□ -0.47
AlyrefO08583 Gm13445-201ENSMUST00000121664 307 ntBASIC12.1□□□□□ -0.47
AlyrefO08583 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.1□□□□□ -0.47
AlyrefO08583 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC12.1□□□□□ -0.47
AlyrefO08583 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.1□□□□□ -0.47
AlyrefO08583 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
AlyrefO08583 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.1□□□□□ -0.47
AlyrefO08583 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC12.1□□□□□ -0.47
AlyrefO08583 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
AlyrefO08583 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC12.1□□□□□ -0.47
AlyrefO08583 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Gm42919-201ENSMUST00000197753 1284 ntBASIC12.1□□□□□ -0.47
AlyrefO08583 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
AlyrefO08583 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
AlyrefO08583 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.1□□□□□ -0.47
AlyrefO08583 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.1□□□□□ -0.47
AlyrefO08583 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AlyrefO08583 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC12.09□□□□□ -0.47
AlyrefO08583 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
AlyrefO08583 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.09□□□□□ -0.47
AlyrefO08583 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
AlyrefO08583 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
AlyrefO08583 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.09□□□□□ -0.47
AlyrefO08583 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 Gm25076-201ENSMUST00000104098 132 ntBASIC12.09□□□□□ -0.47
AlyrefO08583 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
AlyrefO08583 Gm11996-201ENSMUST00000117538 915 ntBASIC12.09□□□□□ -0.47
AlyrefO08583 Gm11560-201ENSMUST00000117567 948 ntBASIC12.09□□□□□ -0.47
AlyrefO08583 Gm12961-201ENSMUST00000120507 1050 ntBASIC12.09□□□□□ -0.47
AlyrefO08583 Gm15566-201ENSMUST00000121130 590 ntBASIC12.09□□□□□ -0.47
AlyrefO08583 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.09□□□□□ -0.47
AlyrefO08583 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC12.09□□□□□ -0.47
AlyrefO08583 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
AlyrefO08583 Gm4775-201ENSMUST00000169588 402 ntBASIC12.09□□□□□ -0.47
AlyrefO08583 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
AlyrefO08583 Gm21092-201ENSMUST00000178995 955 ntBASIC12.09□□□□□ -0.47
AlyrefO08583 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.09□□□□□ -0.47
AlyrefO08583 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC12.09□□□□□ -0.47
AlyrefO08583 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.09□□□□□ -0.47
AlyrefO08583 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC12.09□□□□□ -0.47
AlyrefO08583 Gm18552-201ENSMUST00000187425 538 ntBASIC12.09□□□□□ -0.47
AlyrefO08583 Gm37782-201ENSMUST00000194879 678 ntBASIC12.09□□□□□ -0.47
AlyrefO08583 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.09□□□□□ -0.47
AlyrefO08583 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.09□□□□□ -0.47
AlyrefO08583 Gm5650-201ENSMUST00000209641 598 ntBASIC12.09□□□□□ -0.47
AlyrefO08583 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 Gm39404-201ENSMUST00000216350 313 ntBASIC12.09□□□□□ -0.47
AlyrefO08583 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
AlyrefO08583 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
AlyrefO08583 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
AlyrefO08583 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
AlyrefO08583 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms