Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm23255-201ENSMUST00000102244 110 ntBASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Gm7627-201ENSMUST00000183205 999 ntBASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Gm45527-201ENSMUST00000211052 774 ntBASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Gm9791-201ENSMUST00000060997 447 ntBASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Gm43463-201ENSMUST00000195967 1803 ntBASIC16.35■□□□□ 0.21
Hfm1D3Z4R1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Gm23745-201ENSMUST00000104230 125 ntBASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hfm1D3Z4R1 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.33■□□□□ 0.21
Hfm1D3Z4R1 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hfm1D3Z4R1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Hfm1D3Z4R1 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hfm1D3Z4R1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
Hfm1D3Z4R1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC16.33■□□□□ 0.21
Hfm1D3Z4R1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hfm1D3Z4R1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Gm22937-201ENSMUST00000103954 131 ntBASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Gm7238-201ENSMUST00000206467 973 ntBASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Gm5178-201ENSMUST00000219380 898 ntBASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Arhgef33-210ENSMUST00000225548 456 ntBASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC16.33■□□□□ 0.2
Hfm1D3Z4R1 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Gm15136-201ENSMUST00000120552 533 ntBASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Gm7069-201ENSMUST00000182418 1008 ntBASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Gm7985-201ENSMUST00000183329 981 ntBASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Gm42660-201ENSMUST00000197733 947 ntBASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 AC102847.1-202ENSMUST00000226313 1245 ntBASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Gm26782-203ENSMUST00000227103 751 ntBASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Gm6564-201ENSMUST00000075377 619 ntBASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms