Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ccdc112A0AUP1 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Gm23270-201ENSMUST00000104055 131 ntBASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Gm11439-201ENSMUST00000118598 409 ntBASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Gm19287-201ENSMUST00000203190 358 ntBASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Gm19187-201ENSMUST00000206781 892 ntBASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Gm18935-201ENSMUST00000212692 664 ntBASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.47□□□□□ -0.25
Ccdc112A0AUP1 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Gm27572-201ENSMUST00000183702 255 ntBASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc112A0AUP1 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc112A0AUP1 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc112A0AUP1 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc112A0AUP1 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc112A0AUP1 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.46□□□□□ -0.26
Ccdc112A0AUP1 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc112A0AUP1 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc112A0AUP1 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc112A0AUP1 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc112A0AUP1 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc112A0AUP1 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc112A0AUP1 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Ccdc112A0AUP1 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc112A0AUP1 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc112A0AUP1 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc112A0AUP1 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc112A0AUP1 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc112A0AUP1 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc112A0AUP1 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.45□□□□□ -0.26
Ccdc112A0AUP1 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc112A0AUP1 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.45□□□□□ -0.26
Ccdc112A0AUP1 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc112A0AUP1 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc112A0AUP1 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.45□□□□□ -0.26
Ccdc112A0AUP1 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms