Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Gm12384-201ENSMUST00000119228 919 ntBASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Gm13689-201ENSMUST00000119360 685 ntBASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Gm44397-201ENSMUST00000195950 113 ntBASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Gm43416-201ENSMUST00000201916 1015 ntBASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 AC165260.3-202ENSMUST00000224550 1031 ntBASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 AC132863.2-201ENSMUST00000226643 799 ntBASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trav8-1A0A075B641 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Gm29358-202ENSMUST00000187941 3227 ntBASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Gm23363-201ENSMUST00000175024 79 ntBASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Gm28693-202ENSMUST00000190758 331 ntBASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Gm44064-201ENSMUST00000204964 1087 ntBASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Gm7730-201ENSMUST00000212486 454 ntBASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Gm6983-201ENSMUST00000214912 628 ntBASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 AC154527.2-201ENSMUST00000225256 1466 ntBASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Gm15544-201ENSMUST00000118776 1531 ntBASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Gm38157-201ENSMUST00000194178 1698 ntBASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trav8-1A0A075B641 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms