Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdc40Q9DC48 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Gm14644-201ENSMUST00000116671 647 ntBASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Gm13611-201ENSMUST00000118269 318 ntBASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Gm43947-201ENSMUST00000203019 959 ntBASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Gm19994-201ENSMUST00000217086 586 ntBASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cdc40Q9DC48 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.02□□□□□ -0.64
Cdc40Q9DC48 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdc40Q9DC48 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdc40Q9DC48 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdc40Q9DC48 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdc40Q9DC48 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Cdc40Q9DC48 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdc40Q9DC48 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdc40Q9DC48 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdc40Q9DC48 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdc40Q9DC48 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 Rprl1-201ENSMUST00000158050 327 ntBASIC11.02□□□□□ -0.65
Cdc40Q9DC48 Gm35960-201ENSMUST00000202712 767 ntBASIC11.02□□□□□ -0.65
Cdc40Q9DC48 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.02□□□□□ -0.65
Cdc40Q9DC48 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.02□□□□□ -0.65
Cdc40Q9DC48 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cdc40Q9DC48 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms