Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Matn2-203ENSMUST00000226766 3252 ntBASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.32□□□□□ -0.6
Otud1Q9CUB6 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Gm38262-201ENSMUST00000194760 1382 ntBASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Gm12857-201ENSMUST00000117678 592 ntBASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Gm15004-201ENSMUST00000119192 630 ntBASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Gm8343-201ENSMUST00000182705 994 ntBASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Gm5733-201ENSMUST00000190232 939 ntBASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Gm5705-201ENSMUST00000066241 711 ntBASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Otud1Q9CUB6 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Gm9136-201ENSMUST00000193368 454 ntBASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Gm44100-201ENSMUST00000204329 436 ntBASIC11.3□□□□□ -0.6
Otud1Q9CUB6 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Olfr1153-201ENSMUST00000052300 957 ntBASIC11.3□□□□□ -0.6
Otud1Q9CUB6 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms