Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim33Q99PP7 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Gm6312-201ENSMUST00000204060 1194 ntBASIC11.86□□□□□ -0.51
Trim33Q99PP7 Gm44651-201ENSMUST00000207343 372 ntBASIC11.86□□□□□ -0.51
Trim33Q99PP7 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.86□□□□□ -0.51
Trim33Q99PP7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Cog3-203ENSMUST00000227473 4197 ntBASIC11.85□□□□□ -0.51
Trim33Q99PP7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.85□□□□□ -0.51
Trim33Q99PP7 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Gm25700-201ENSMUST00000177693 110 ntBASIC11.85□□□□□ -0.51
Trim33Q99PP7 Gm27390-201ENSMUST00000184516 176 ntBASIC11.85□□□□□ -0.51
Trim33Q99PP7 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.85□□□□□ -0.51
Trim33Q99PP7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.85□□□□□ -0.51
Trim33Q99PP7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.85□□□□□ -0.51
Trim33Q99PP7 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim33Q99PP7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.84□□□□□ -0.51
Trim33Q99PP7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.84□□□□□ -0.51
Trim33Q99PP7 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.84□□□□□ -0.51
Trim33Q99PP7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim33Q99PP7 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms