Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.7□□□□□ -0.7
Raf1Q99N57 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.7□□□□□ -0.7
Raf1Q99N57 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Raf1Q99N57 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.69□□□□□ -0.7
Raf1Q99N57 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Raf1Q99N57 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.69□□□□□ -0.7
Raf1Q99N57 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.69□□□□□ -0.7
Raf1Q99N57 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.69□□□□□ -0.7
Raf1Q99N57 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.69□□□□□ -0.7
Raf1Q99N57 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Raf1Q99N57 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Raf1Q99N57 Gm12314-201ENSMUST00000118104 538 ntBASIC10.69□□□□□ -0.7
Raf1Q99N57 Gm13315-201ENSMUST00000120376 991 ntBASIC10.69□□□□□ -0.7
Raf1Q99N57 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.69□□□□□ -0.7
Raf1Q99N57 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Raf1Q99N57 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.69□□□□□ -0.7
Raf1Q99N57 Gm5781-201ENSMUST00000219792 443 ntBASIC10.69□□□□□ -0.7
Raf1Q99N57 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.69□□□□□ -0.7
Raf1Q99N57 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.69□□□□□ -0.7
Raf1Q99N57 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Raf1Q99N57 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Raf1Q99N57 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Raf1Q99N57 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Raf1Q99N57 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.69□□□□□ -0.7
Raf1Q99N57 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Raf1Q99N57 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Raf1Q99N57 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.68□□□□□ -0.7
Raf1Q99N57 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.68□□□□□ -0.7
Raf1Q99N57 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.68□□□□□ -0.7
Raf1Q99N57 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Raf1Q99N57 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Raf1Q99N57 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.68□□□□□ -0.7
Raf1Q99N57 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Raf1Q99N57 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Raf1Q99N57 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.68□□□□□ -0.7
Raf1Q99N57 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Raf1Q99N57 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Raf1Q99N57 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Raf1Q99N57 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Raf1Q99N57 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Raf1Q99N57 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Raf1Q99N57 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
Raf1Q99N57 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Raf1Q99N57 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Raf1Q99N57 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.68□□□□□ -0.7
Raf1Q99N57 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.68□□□□□ -0.7
Raf1Q99N57 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.68□□□□□ -0.7
Raf1Q99N57 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.68□□□□□ -0.7
Raf1Q99N57 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Raf1Q99N57 Gm3890-201ENSMUST00000182416 207 ntBASIC10.68□□□□□ -0.7
Raf1Q99N57 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Raf1Q99N57 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.68□□□□□ -0.7
Raf1Q99N57 Morn2-202ENSMUST00000227729 656 ntBASIC10.68□□□□□ -0.7
Raf1Q99N57 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Raf1Q99N57 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Raf1Q99N57 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Raf1Q99N57 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Raf1Q99N57 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Raf1Q99N57 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.68□□□□□ -0.7
Raf1Q99N57 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Raf1Q99N57 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms