Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Gm12196-201ENSMUST00000120954 262 ntBASIC12.35□□□□□ -0.43
Usp3Q91W36 Gm25881-201ENSMUST00000157783 103 ntBASIC12.35□□□□□ -0.43
Usp3Q91W36 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Usp3Q91W36 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Usp3Q91W36 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Usp3Q91W36 Gm28195-201ENSMUST00000186992 372 ntBASIC12.35□□□□□ -0.43
Usp3Q91W36 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC12.35□□□□□ -0.43
Usp3Q91W36 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.35□□□□□ -0.43
Usp3Q91W36 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.35□□□□□ -0.43
Usp3Q91W36 Gm4870-201ENSMUST00000198525 1251 ntBASIC12.35□□□□□ -0.43
Usp3Q91W36 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC12.35□□□□□ -0.43
Usp3Q91W36 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.35□□□□□ -0.43
Usp3Q91W36 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC12.35□□□□□ -0.43
Usp3Q91W36 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.35□□□□□ -0.43
Usp3Q91W36 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.35□□□□□ -0.43
Usp3Q91W36 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Usp3Q91W36 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Usp3Q91W36 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Usp3Q91W36 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Usp3Q91W36 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.35□□□□□ -0.43
Usp3Q91W36 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Usp3Q91W36 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp3Q91W36 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.35□□□□□ -0.43
Usp3Q91W36 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.35□□□□□ -0.43
Usp3Q91W36 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.34□□□□□ -0.43
Usp3Q91W36 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Gm12857-201ENSMUST00000117678 592 ntBASIC12.34□□□□□ -0.43
Usp3Q91W36 Gm14724-201ENSMUST00000118400 537 ntBASIC12.34□□□□□ -0.43
Usp3Q91W36 Gm11450-201ENSMUST00000121144 333 ntBASIC12.34□□□□□ -0.43
Usp3Q91W36 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Mir5132-201ENSMUST00000175166 71 ntBASIC12.34□□□□□ -0.43
Usp3Q91W36 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Gm3650-201ENSMUST00000180600 747 ntBASIC12.34□□□□□ -0.43
Usp3Q91W36 Gm42433-201ENSMUST00000196806 940 ntBASIC12.34□□□□□ -0.43
Usp3Q91W36 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Gm9797-202ENSMUST00000218003 294 ntBASIC12.34□□□□□ -0.43
Usp3Q91W36 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp3Q91W36 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Gm21811-201ENSMUST00000096485 930 ntBASIC12.34□□□□□ -0.43
Usp3Q91W36 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.34□□□□□ -0.43
Usp3Q91W36 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp3Q91W36 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Usp3Q91W36 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.34□□□□□ -0.43
Usp3Q91W36 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms