Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rprd1aQ8VDS4 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.23□□□□□ -0.45
Rprd1aQ8VDS4 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rprd1aQ8VDS4 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.23□□□□□ -0.45
Rprd1aQ8VDS4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.23□□□□□ -0.45
Rprd1aQ8VDS4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rprd1aQ8VDS4 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.23□□□□□ -0.45
Rprd1aQ8VDS4 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rprd1aQ8VDS4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rprd1aQ8VDS4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Gm12501-201ENSMUST00000119163 529 ntBASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rprd1aQ8VDS4 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Gm15515-201ENSMUST00000117827 822 ntBASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Gm18734-201ENSMUST00000172937 808 ntBASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Gm21811-201ENSMUST00000096485 930 ntBASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.21□□□□□ -0.45
Rprd1aQ8VDS4 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rprd1aQ8VDS4 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Rprd1aQ8VDS4 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rprd1aQ8VDS4 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rprd1aQ8VDS4 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.21□□□□□ -0.46
Rprd1aQ8VDS4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rprd1aQ8VDS4 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rprd1aQ8VDS4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rprd1aQ8VDS4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Rprd1aQ8VDS4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.21□□□□□ -0.46
Rprd1aQ8VDS4 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rprd1aQ8VDS4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rprd1aQ8VDS4 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rprd1aQ8VDS4 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rprd1aQ8VDS4 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.2□□□□□ -0.46
Rprd1aQ8VDS4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms