Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Mir877-201ENSMUST00000104738 85 ntBASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Gm11930-201ENSMUST00000117788 190 ntBASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Gm15547-201ENSMUST00000122152 333 ntBASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Gm8712-201ENSMUST00000221090 701 ntBASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.58□□□□□ -0.4
Trerf1Q8BXJ2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trerf1Q8BXJ2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Gm15808-201ENSMUST00000119046 604 ntBASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms