Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Gm26361-201ENSMUST00000158868 186 ntBASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Gm9996-201ENSMUST00000070359 913 ntBASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cpsf4Q8BQZ5 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Gm14130-201ENSMUST00000118417 987 ntBASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Gm14208-201ENSMUST00000119645 678 ntBASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Rprl1-202ENSMUST00000198476 238 ntBASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Gm44651-201ENSMUST00000207343 372 ntBASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.48□□□□□ -0.57
Cpsf4Q8BQZ5 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Cpsf4Q8BQZ5 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms