Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Gm27530-201ENSMUST00000184096 98 ntBASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Gm7467-201ENSMUST00000185173 652 ntBASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Gm29787-201ENSMUST00000222129 849 ntBASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nudcd1Q6PIP5 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Gm10051-201ENSMUST00000145209 414 ntBASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Gm43916-201ENSMUST00000205062 967 ntBASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Gm45770-201ENSMUST00000212105 616 ntBASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Nudcd1Q6PIP5 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nudcd1Q6PIP5 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nudcd1Q6PIP5 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nudcd1Q6PIP5 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nudcd1Q6PIP5 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nudcd1Q6PIP5 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nudcd1Q6PIP5 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nudcd1Q6PIP5 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.5
Nudcd1Q6PIP5 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Nudcd1Q6PIP5 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nudcd1Q6PIP5 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nudcd1Q6PIP5 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nudcd1Q6PIP5 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nudcd1Q6PIP5 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms