Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CtifQ6PEE2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CtifQ6PEE2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CtifQ6PEE2 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CtifQ6PEE2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.61□□□□□ -0.39
CtifQ6PEE2 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.61□□□□□ -0.39
CtifQ6PEE2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CtifQ6PEE2 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CtifQ6PEE2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CtifQ6PEE2 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CtifQ6PEE2 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC12.61□□□□□ -0.39
CtifQ6PEE2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CtifQ6PEE2 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CtifQ6PEE2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.6□□□□□ -0.39
CtifQ6PEE2 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Gm5706-201ENSMUST00000181525 993 ntBASIC12.6□□□□□ -0.39
CtifQ6PEE2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Gm8602-201ENSMUST00000184045 607 ntBASIC12.6□□□□□ -0.39
CtifQ6PEE2 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.6□□□□□ -0.39
CtifQ6PEE2 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.6□□□□□ -0.39
CtifQ6PEE2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Erich3-203ENSMUST00000189969 3460 ntBASIC12.6□□□□□ -0.39
CtifQ6PEE2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CtifQ6PEE2 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.59□□□□□ -0.39
CtifQ6PEE2 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Gm43143-201ENSMUST00000196083 2023 ntBASIC12.59□□□□□ -0.39
CtifQ6PEE2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.59□□□□□ -0.39
CtifQ6PEE2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Gm23912-201ENSMUST00000104687 87 ntBASIC12.59□□□□□ -0.39
CtifQ6PEE2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CtifQ6PEE2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Gm18473-201ENSMUST00000220543 868 ntBASIC12.59□□□□□ -0.39
CtifQ6PEE2 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CtifQ6PEE2 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
CtifQ6PEE2 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
CtifQ6PEE2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.58□□□□□ -0.39
CtifQ6PEE2 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
CtifQ6PEE2 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms