Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.9□□□□□ -0.66
Cd47Q61735 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd47Q61735 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd47Q61735 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd47Q61735 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd47Q61735 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cd47Q61735 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd47Q61735 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Cd47Q61735 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cd47Q61735 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd47Q61735 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Cd47Q61735 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cd47Q61735 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.9□□□□□ -0.66
Cd47Q61735 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cd47Q61735 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cd47Q61735 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.9□□□□□ -0.67
Cd47Q61735 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.9□□□□□ -0.67
Cd47Q61735 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cd47Q61735 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.89□□□□□ -0.67
Cd47Q61735 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.89□□□□□ -0.67
Cd47Q61735 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Cd47Q61735 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Cd47Q61735 Gm23912-201ENSMUST00000104687 87 ntBASIC10.89□□□□□ -0.67
Cd47Q61735 Gm4986-201ENSMUST00000119731 549 ntBASIC10.89□□□□□ -0.67
Cd47Q61735 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.89□□□□□ -0.67
Cd47Q61735 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.89□□□□□ -0.67
Cd47Q61735 Mospd4-201ENSMUST00000180618 576 ntBASIC10.89□□□□□ -0.67
Cd47Q61735 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Gm36943-201ENSMUST00000194422 282 ntBASIC10.89□□□□□ -0.67
Cd47Q61735 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC10.89□□□□□ -0.67
Cd47Q61735 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.89□□□□□ -0.67
Cd47Q61735 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.89□□□□□ -0.67
Cd47Q61735 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.89□□□□□ -0.67
Cd47Q61735 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.89□□□□□ -0.67
Cd47Q61735 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd47Q61735 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cd47Q61735 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Cd47Q61735 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.89□□□□□ -0.67
Cd47Q61735 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
Cd47Q61735 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cd47Q61735 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.88□□□□□ -0.67
Cd47Q61735 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cd47Q61735 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cd47Q61735 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.88□□□□□ -0.67
Cd47Q61735 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Gm43221-201ENSMUST00000197612 2071 ntBASIC10.88□□□□□ -0.67
Cd47Q61735 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.88□□□□□ -0.67
Cd47Q61735 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.88□□□□□ -0.67
Cd47Q61735 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.88□□□□□ -0.67
Cd47Q61735 Gm37424-201ENSMUST00000191727 561 ntBASIC10.88□□□□□ -0.67
Cd47Q61735 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.88□□□□□ -0.67
Cd47Q61735 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC10.88□□□□□ -0.67
Cd47Q61735 Gm34272-201ENSMUST00000208886 253 ntBASIC10.88□□□□□ -0.67
Cd47Q61735 Gm45880-201ENSMUST00000213041 853 ntBASIC10.88□□□□□ -0.67
Cd47Q61735 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cd47Q61735 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.88□□□□□ -0.67
Cd47Q61735 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.88□□□□□ -0.67
Cd47Q61735 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Cd47Q61735 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd47Q61735 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms