Protein–RNA interactions for Protein: Q61687

Atrx, Transcriptional regulator ATRX, mousemouse

Known RBP Predictions only

Length 2,476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtrxQ61687 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.79□□□□□ -0.68
AtrxQ61687 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
AtrxQ61687 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.79□□□□□ -0.68
AtrxQ61687 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
AtrxQ61687 Gm14942-201ENSMUST00000119642 336 ntBASIC10.79□□□□□ -0.68
AtrxQ61687 Gm11544-201ENSMUST00000120215 382 ntBASIC10.79□□□□□ -0.68
AtrxQ61687 Gm12961-201ENSMUST00000120507 1050 ntBASIC10.79□□□□□ -0.68
AtrxQ61687 Gm16210-201ENSMUST00000122161 610 ntBASIC10.79□□□□□ -0.68
AtrxQ61687 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
AtrxQ61687 Gm45592-201ENSMUST00000209605 1043 ntBASIC10.79□□□□□ -0.68
AtrxQ61687 Gm9797-202ENSMUST00000218003 294 ntBASIC10.79□□□□□ -0.68
AtrxQ61687 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC10.79□□□□□ -0.68
AtrxQ61687 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10.79□□□□□ -0.68
AtrxQ61687 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
AtrxQ61687 Gm10580-201ENSMUST00000097985 396 ntBASIC10.79□□□□□ -0.68
AtrxQ61687 Gm10581-201ENSMUST00000097986 231 ntBASIC10.79□□□□□ -0.68
AtrxQ61687 Gm10582-201ENSMUST00000097987 396 ntBASIC10.79□□□□□ -0.68
AtrxQ61687 Gm10583-201ENSMUST00000097988 396 ntBASIC10.79□□□□□ -0.68
AtrxQ61687 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
AtrxQ61687 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.79□□□□□ -0.68
AtrxQ61687 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
AtrxQ61687 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
AtrxQ61687 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
AtrxQ61687 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
AtrxQ61687 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.78□□□□□ -0.68
AtrxQ61687 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.78□□□□□ -0.68
AtrxQ61687 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC10.78□□□□□ -0.68
AtrxQ61687 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.78□□□□□ -0.68
AtrxQ61687 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC10.78□□□□□ -0.68
AtrxQ61687 Gm19228-201ENSMUST00000214030 717 ntBASIC10.78□□□□□ -0.68
AtrxQ61687 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.78□□□□□ -0.68
AtrxQ61687 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
AtrxQ61687 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.78□□□□□ -0.68
AtrxQ61687 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
AtrxQ61687 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.78□□□□□ -0.68
AtrxQ61687 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
AtrxQ61687 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
AtrxQ61687 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Gm11619-201ENSMUST00000117474 237 ntBASIC10.78□□□□□ -0.68
AtrxQ61687 Gm14247-201ENSMUST00000120950 237 ntBASIC10.78□□□□□ -0.68
AtrxQ61687 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC10.78□□□□□ -0.68
AtrxQ61687 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
AtrxQ61687 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.78□□□□□ -0.68
AtrxQ61687 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
AtrxQ61687 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.77□□□□□ -0.68
AtrxQ61687 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
AtrxQ61687 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
AtrxQ61687 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
AtrxQ61687 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
AtrxQ61687 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms