Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gli3Q61602 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gli3Q61602 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gli3Q61602 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Gli3Q61602 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC15.54■□□□□ 0.08
Gli3Q61602 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Gli3Q61602 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC15.54■□□□□ 0.08
Gli3Q61602 Gm8525-201ENSMUST00000189674 861 ntBASIC15.54■□□□□ 0.08
Gli3Q61602 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC15.54■□□□□ 0.08
Gli3Q61602 AC133496.1-201ENSMUST00000223891 743 ntBASIC15.54■□□□□ 0.08
Gli3Q61602 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gli3Q61602 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gli3Q61602 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gli3Q61602 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gli3Q61602 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gli3Q61602 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gli3Q61602 Gm37160-201ENSMUST00000193081 1689 ntBASIC15.54■□□□□ 0.08
Gli3Q61602 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Gli3Q61602 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Gli3Q61602 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gli3Q61602 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gli3Q61602 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Gli3Q61602 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.54■□□□□ 0.08
Gli3Q61602 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gli3Q61602 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Gli3Q61602 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gli3Q61602 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Gli3Q61602 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gli3Q61602 Fam220-ps-201ENSMUST00000116535 783 ntBASIC15.53■□□□□ 0.08
Gli3Q61602 Gm7781-201ENSMUST00000117258 788 ntBASIC15.53■□□□□ 0.08
Gli3Q61602 Gm15476-201ENSMUST00000118247 1191 ntBASIC15.53■□□□□ 0.08
Gli3Q61602 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC15.53■□□□□ 0.08
Gli3Q61602 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC15.53■□□□□ 0.08
Gli3Q61602 Gm37597-201ENSMUST00000191853 382 ntBASIC15.53■□□□□ 0.08
Gli3Q61602 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Gli3Q61602 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Gli3Q61602 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Gli3Q61602 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC15.53■□□□□ 0.08
Gli3Q61602 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.53■□□□□ 0.08
Gli3Q61602 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Gli3Q61602 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
Gli3Q61602 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Gli3Q61602 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC15.53■□□□□ 0.08
Gli3Q61602 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC15.53■□□□□ 0.08
Gli3Q61602 Gm11380-201ENSMUST00000118067 560 ntBASIC15.53■□□□□ 0.08
Gli3Q61602 Gm8876-201ENSMUST00000120768 1122 ntBASIC15.53■□□□□ 0.08
Gli3Q61602 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Gm15258-201ENSMUST00000153801 741 ntBASIC15.53■□□□□ 0.08
Gli3Q61602 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Gli3Q61602 Gm26379-201ENSMUST00000178125 138 ntBASIC15.53■□□□□ 0.08
Gli3Q61602 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Gm44124-201ENSMUST00000204159 472 ntBASIC15.53■□□□□ 0.08
Gli3Q61602 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Gli3Q61602 Gm45258-201ENSMUST00000210042 853 ntBASIC15.53■□□□□ 0.08
Gli3Q61602 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC15.53■□□□□ 0.08
Gli3Q61602 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Gm5194-201ENSMUST00000221457 742 ntBASIC15.53■□□□□ 0.08
Gli3Q61602 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Gli3Q61602 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Gli3Q61602 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC15.53■□□□□ 0.08
Gli3Q61602 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC15.53■□□□□ 0.08
Gli3Q61602 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Gli3Q61602 Gm7104-201ENSMUST00000179741 2532 ntBASIC15.53■□□□□ 0.08
Gli3Q61602 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gli3Q61602 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Gli3Q61602 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gli3Q61602 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gli3Q61602 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gli3Q61602 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Gli3Q61602 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gli3Q61602 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gli3Q61602 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gli3Q61602 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gli3Q61602 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gli3Q61602 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gli3Q61602 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gli3Q61602 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gli3Q61602 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gli3Q61602 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gli3Q61602 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.52■□□□□ 0.07
Gli3Q61602 Gm14398-201ENSMUST00000117287 1073 ntBASIC15.52■□□□□ 0.07
Gli3Q61602 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC15.52■□□□□ 0.07
Gli3Q61602 Gm38349-201ENSMUST00000195732 462 ntBASIC15.52■□□□□ 0.07
Gli3Q61602 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC15.52■□□□□ 0.07
Gli3Q61602 Gm9619-201ENSMUST00000211587 762 ntBASIC15.52■□□□□ 0.07
Gli3Q61602 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Gli3Q61602 Gm18042-201ENSMUST00000219887 790 ntBASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms