Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccne1Q61457 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccne1Q61457 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccne1Q61457 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccne1Q61457 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccne1Q61457 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Ccne1Q61457 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccne1Q61457 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC15.34■□□□□ 0.05
Ccne1Q61457 Gm45410-201ENSMUST00000211331 1093 ntBASIC15.34■□□□□ 0.05
Ccne1Q61457 CT573047.1-201ENSMUST00000223652 851 ntBASIC15.34■□□□□ 0.05
Ccne1Q61457 CT009536.2-201ENSMUST00000225370 665 ntBASIC15.34■□□□□ 0.05
Ccne1Q61457 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccne1Q61457 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccne1Q61457 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccne1Q61457 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccne1Q61457 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ccne1Q61457 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ccne1Q61457 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Ccne1Q61457 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccne1Q61457 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccne1Q61457 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ccne1Q61457 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccne1Q61457 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccne1Q61457 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC15.33■□□□□ 0.05
Ccne1Q61457 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccne1Q61457 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ccne1Q61457 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccne1Q61457 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccne1Q61457 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ccne1Q61457 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccne1Q61457 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC15.33■□□□□ 0.04
Ccne1Q61457 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccne1Q61457 Gm12030-201ENSMUST00000121917 223 ntBASIC15.33■□□□□ 0.04
Ccne1Q61457 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC15.33■□□□□ 0.04
Ccne1Q61457 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccne1Q61457 Gm26047-201ENSMUST00000157308 113 ntBASIC15.33■□□□□ 0.04
Ccne1Q61457 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC15.33■□□□□ 0.04
Ccne1Q61457 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ccne1Q61457 Gm26047-202ENSMUST00000198840 115 ntBASIC15.33■□□□□ 0.04
Ccne1Q61457 Gm45484-201ENSMUST00000210310 1141 ntBASIC15.33■□□□□ 0.04
Ccne1Q61457 AC165154.1-201ENSMUST00000226661 340 ntBASIC15.33■□□□□ 0.04
Ccne1Q61457 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ccne1Q61457 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccne1Q61457 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccne1Q61457 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccne1Q61457 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccne1Q61457 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccne1Q61457 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccne1Q61457 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccne1Q61457 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccne1Q61457 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccne1Q61457 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ccne1Q61457 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccne1Q61457 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ccne1Q61457 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ccne1Q61457 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccne1Q61457 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccne1Q61457 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ccne1Q61457 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC15.32■□□□□ 0.04
Ccne1Q61457 AC114645.1-201ENSMUST00000215831 187 ntBASIC15.32■□□□□ 0.04
Ccne1Q61457 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ccne1Q61457 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ccne1Q61457 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC15.32■□□□□ 0.04
Ccne1Q61457 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ccne1Q61457 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ccne1Q61457 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.32■□□□□ 0.04
Ccne1Q61457 Gm37600-201ENSMUST00000193764 3292 ntBASIC15.32■□□□□ 0.04
Ccne1Q61457 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccne1Q61457 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Ccne1Q61457 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccne1Q61457 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccne1Q61457 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccne1Q61457 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ccne1Q61457 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccne1Q61457 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Ccne1Q61457 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ccne1Q61457 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ccne1Q61457 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccne1Q61457 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccne1Q61457 Gm12247-201ENSMUST00000117585 670 ntBASIC15.31■□□□□ 0.04
Ccne1Q61457 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccne1Q61457 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC15.31■□□□□ 0.04
Ccne1Q61457 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms