Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm11700-201ENSMUST00000119409 403 ntBASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm12091-201ENSMUST00000146791 830 ntBASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm17931-201ENSMUST00000208132 634 ntBASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 AC135669.1-201ENSMUST00000213585 412 ntBASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm11918-201ENSMUST00000121660 179 ntBASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm14441-201ENSMUST00000121960 540 ntBASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Rprl1-201ENSMUST00000158050 327 ntBASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm8652-201ENSMUST00000181363 964 ntBASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm27437-201ENSMUST00000183429 107 ntBASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm27486-201ENSMUST00000184923 80 ntBASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Mir6977-201ENSMUST00000184960 64 ntBASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm6473-201ENSMUST00000188572 1210 ntBASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm8515-201ENSMUST00000194852 576 ntBASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav15-1-dv6-1Q5R1D2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms